BioCif.Core 0.9.0

.NET Standard 2.0 .NET Framework 4.5
Install-Package BioCif.Core -Version 0.9.0
dotnet add package BioCif.Core --version 0.9.0
<PackageReference Include="BioCif.Core" Version="0.9.0" />
For projects that support PackageReference, copy this XML node into the project file to reference the package.
paket add BioCif.Core --version 0.9.0
The NuGet Team does not provide support for this client. Please contact its maintainers for support.
#r "nuget: BioCif.Core, 0.9.0"
#r directive can be used in F# Interactive, C# scripting and .NET Interactive. Copy this into the interactive tool or source code of the script to reference the package.
// Install BioCif.Core as a Cake Addin
#addin nuget:?package=BioCif.Core&version=0.9.0

// Install BioCif.Core as a Cake Tool
#tool nuget:?package=BioCif.Core&version=0.9.0
The NuGet Team does not provide support for this client. Please contact its maintainers for support.

The core library for parsing all types of Crystallographic Information File (CIF) such as the PDBx/mmCIF format from the protein data bank (PDB).

Contains the core tokenizer and parser.


To access the raw stream of tokens:

using BioCif.Core.Tokenization;
using BioCif.Core.Tokens;

using (var fileStream = File.Open(@"C:\path\to\data.cif"))
using (var streamReader = new StreamReader(fileStream))
    foreach (Token token in CifTokenizer.Tokenize(streamReader))

To access the parsed CIF structure:

using (var fileStream = File.Open(@"C:\path\to\data.cif"))
    Cif cif = CifParser.Parse(fileStream);

    DataBlock block = cif.DataBlocks[0];
    Console.WriteLine($"Block name: {block.Name}");

    foreach (IDataBlockMember member in block.Members)
        // ...
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Compatible target framework(s)
Additional computed target framework(s)
Learn more about Target Frameworks and .NET Standard.
  • .NETFramework 4.5

    • No dependencies.
  • .NETStandard 2.0

    • No dependencies.

NuGet packages

This package is not used by any NuGet packages.

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Version Downloads Last updated
0.9.0 367 3/28/2020